A network approach to topic models

One of the main computational and scientific challenges in the modern age is to extract useful information from unstructured texts. Topic models are one popular machine-learning approach which infers the latent topical structure of a collection of documents. Despite their success --- in particular of its most widely used variant called Latent Dirichlet Allocation (LDA) --- and numerous applications in sociology, history, and linguistics, topic models are known to suffer from severe conceptual and practical problems, e.g. a lack of justification for the Bayesian priors, discrepancies with statistical properties of real texts, and the inability to properly choose the number of topics. Here we obtain a fresh view on the problem of identifying topical structures by relating it to the problem of finding communities in complex networks. This is achieved by representing text corpora as bipartite networks of documents and words. By adapting existing community-detection methods -- using a stochastic block model (SBM) with non-parametric priors -- we obtain a more versatile and principled framework for topic modeling (e.g., it automatically detects the number of topics and hierarchically clusters both the words and documents). The analysis of artificial and real corpora demonstrates that our SBM approach leads to better topic models than LDA in terms of statistical model selection. More importantly, our work shows how to formally relate methods from community detection and topic modeling, opening the possibility of cross-fertilization between these two fields.Comment: 22 pages, 10 figures, code available at https://topsbm.github.io

Stimulation of endothelial adenosine Al receptors enhances adhesion of neutrophils in the intact guinea pig coronary system

Objective: The primary aim was to determine the action of pathophysiologically relevant adenosine concentrations (0.1-1 μM) on adhesion of neutrophils to coronary endothelium. Further aims were to evaluate the nature and localisation of the adenosine receptor involved. and to assess the effect of endogenous adenosine. Methods: Adhesion was studied in isolated perfused guinea pig hearts by determining the number of cells emerging in the coronary effluent after intracoronary bolus injections of 600 000 neutrophils prepared from guinea pig or human blood. The system was characterised by the use of the proadhesive stimulus thrombin. Results: A 5 rnin infusion of adenosine (0.1-0.3 μM) or the A1 receptor agonist N6-cyclopentyladenosine (CPA, 0.01 μM) significantly increased adhesion from about 20% (control) to 30%. This effect was prevented by the A1 receptor antagonist dipropyl-8-cyclopentylxanthine (DPCPX. 0.1 μM). It was not diminished by cessation of adenosine infusion 90 s prior to neutrophil injection. At a higher concentration of adenosine (1 μM), adhesion did not seem to be enhanced. However, coinfusion of the A2 receptor antagonist 3,7-dimethyl-1-propargylxanthine (DMPX. 0.1 μM) with 1 μM adenosine unmasked the A1 action, adhesion rising to 39%. Adenosine had a quantitatively identical effect on adhesion of human neutrophils. Total ischaemia of 15 min duration raised adhesion of subsequently applied neutrophils to 35%. This effect was completely blocked by DPCPX, as well as by ischaemic preconditioning (3 X 3 min). Preconditioning raised initial postischaemic coronary effluent adenosine from about 0.8 μM to 1.5 μM. Conclusions: The findings suggest a bimodal participation of adenosine in the development of postischaemic dysfunction by an endothelium dependent modulation of neutrophil adhesion. Stimulation occurs via endothelial A1 receptors at submicromolar adenosine levels, whereas cardioprotection by adenosine may in part relate to the use of pharmacologically high concentrations of adenosine or enhanced endogenous production after preconditioning

Radiation from Violently Accelerated Bodies

A determination is made of the radiation emitted by a linearly uniformly accelerated uncharged dipole transmitter. It is found that, first of all, the radiation rate is given by the familiar Larmor formula, but it is augmented by an amount which becomes dominant for sufficiently high acceleration. For an accelerated dipole oscillator, the criterion is that the center of mass motion become relativistic within one oscillation period. The augmented formula and the measurements which it summarizes presuppose an expanding inertial observation frame. A static inertial reference frame will not do. Secondly, it is found that the radiation measured in the expanding inertial frame is received with 100% fidelity. There is no blueshift or redshift due to the accelerative motion of the transmitter. Finally, it is found that a pair of coherently radiating oscillators accelerating (into opposite directions) in their respective causally disjoint Rindler-coordinatized sectors produces an interference pattern in the expanding inertial frame. Like the pattern of a Young double slit interferometer, this Rindler interferometer pattern has a fringe spacing which is inversely proportional to the proper separation and the proper frequency of the accelerated sources. The interferometer, as well as the augmented Larmor formula, provide a unifying perspective. It joins adjacent Rindler-coordinatized neighborhoods into a single spacetime arena for scattering and radiation from accelerated bodies.Comment: 29 pages, 1 figure, Revte

Paired accelerated arames: The perfect interferometer with everywhere smooth wave amplitudes

Rindler's acceleration-induced partitioning of spacetime leads to a nature-given interferometer. It accomodates quantum mechanical and wave mechanical processes in spacetime which in (Euclidean) optics correspond to wave processes in a ``Mach-Zehnder'' interferometer: amplitude splitting, reflection, and interference. These processes are described in terms of amplitudes which behave smoothly across the event horizons of all four Rindler sectors. In this context there arises quite naturally a complete set of orthonormal wave packet histories, one of whose key properties is their "explosivity index". In the limit of low index values the wave packets trace out fuzzy world lines. By contrast, in the asymptotic limit of high index values, there are no world lines, not even fuzzy ones. Instead, the wave packet histories are those of entities with non-trivial internal collapse and explosion dynamics. Their details are described by the wave processes in the above-mentioned Mach-Zehnder interferometer. Each one of them is a double slit interference process. These wave processes are applied to elucidate the amplification of waves in an accelerated inhomogeneous dielectric. Also discussed are the properties and relationships among the transition amplitudes of an accelerated finite-time detector.Comment: 38 pages, RevTex, 10 figures, 4 mathematical tutorials. Html version of the figures and of related papers available at http://www.math.ohio-state.edu/~gerlac

Test Beam Results of Geometry Optimized Hybrid Pixel Detectors

The Multi-Chip-Module-Deposited (MCM-D) technique has been used to build hybrid pixel detector assemblies. This paper summarises the results of an analysis of data obtained in a test beam campaign at CERN. Here, single chip hybrids made of ATLAS pixel prototype read-out electronics and special sensor tiles were used. They were prepared by the Fraunhofer Institut fuer Zuverlaessigkeit und Mikrointegration, IZM, Berlin, Germany. The sensors feature an optimized sensor geometry called equal sized bricked. This design enhances the spatial resolution for double hits in the long direction of the sensor cells.Comment: Contribution to Proceedings of Pixel2005 Workshop, Bonn Germany 200

Economy and Protein Malnutrition Among the Digo

In short, even where protein malnutrition is primarily a result of poor environment, economy, and technology, other, often less obvious, traditional cultural patterns must be taken into account in any development and improvement program. If kwashiorkor is to be eliminated satisfactorily, and if contingent problems are to be kept to a minimum, these other patterns must often also be modified. The importance of traditional cultural patterns is perhaps best illustrated by an example of a people who suffer from protein malnutrition primarily because of them. The Digo tribe of coastal Kenya and Tanganyika, among whom this writer conducted anthropological field research from October, 1958 to May, 1960, provide an excellent case in point. In spite of an adequate food supply perhaps as many as 25 % of Digo infants up to the age of about five or six suffer from kwashiorkor. Few individuals older than six have kwashiorkor, presumably both because of a change in diet at about this age, and because infants seriously afflicted die. In analyzing this situation, let us first briefly survey Digo environment, economy and diet. Then let us examine Digo concepts about and means of dealing with kwashiorkor. In conclusion, let us consider ways of combating kwashiorkor among the Digo

Effect of Plasma Irradiation on CdI2Cd I_2 films

The effect of plasma irradiation is studied systematically on a 4H polytype (002) oriented ${\rm CdI_2}$ stoichiometric film having compressive residual stress. Plasma irradiation was found to change the orientation to (110) of the film at certain moderate irradiation distances. A linear decrease in grain size and residual stress was observed with decreasing irradiation distance (or increasing ion energy) consistent with both structural and morphological observations. The direct optical energy gap ${\rm E_g}$ was found to increase linearly at the rate ${\rm 15\mu eV/atm}$ with the compressive stress. The combined data of present compressive stress and from earlier reported tensile stress show a consistent trend of ${\rm E_g}$ change with stress. The iodine-iodine distance in the unit cell could be responsible for the observed change in ${\rm E_g}$ with stress.Comment: 13 pages and 10 fi

Coulomb field of an accelerated charge: physical and mathematical aspects

The Maxwell field equations relative to a uniformly accelerated frame, and the variational principle from which they are obtained, are formulated in terms of the technique of geometrical gauge invariant potentials. They refer to the transverse magnetic (TM) and the transeverse electric (TE) modes. This gauge invariant "2+2" decomposition is used to see how the Coulomb field of a charge, static in an accelerated frame, has properties that suggest features of electromagnetism which are different from those in an inertial frame. In particular, (1) an illustrative calculation shows that the Larmor radiation reaction equals the electrostatic attraction between the accelerated charge and the charge induced on the surface whose history is the event horizon, and (2) a spectral decomposition of the Coulomb potential in the accelerated frame suggests the possibility that the distortive effects of this charge on the Rindler vacuum are akin to those of a charge on a crystal lattice.Comment: 27 pages, PlainTex. Related papers available at http://www.math.ohio-state.edu/~gerlac